Team

Jens Lagergren, Ph.D.

Professor

E-mail: jens.lagergren@scilifelab.se
Phone: +46 8 790 64 38
Google Scholar: Jens Lagergren
Twitter: @jens_lagergren

See research.

 

Marzie Abdolhamdi

Ph.D. student



 

Saeedeh Akbari

Post-Doc

Saeedeh’s project is focused on a computational biology project of single-cell sequences and finding information about cell lineage based on them. She also works on variational Bayesian methods for phylogenetic inference and single-cell sequencing problems.

E-mail: saeedeh.akbari@scilifelab.se

 

Semih Kurt

Ph.D. student

Semih’s research interests are probabilistic models and inferences for single-cell sequencing.

E-mail: semih.kurt@scilifelab.se

 

Oskar Kviman

Ph.D. student

Oskar’s project concerns developing probabilistic machine learning and deep learning methods for phylogenetic tree inference and single cell-seq problems. 

E-mail: okviman@kth.se
Google Scholar: Oskar Kviman

 

Harald Melin

Ph.D. student

Harald’s project focuses on variational Bayesian methods for phylogenetic inference of metastatic cancer using single-cell data.

E-mail: haraldme@kth.se

 

Ricky Molén

Ph.D. student

Ricky’s research focuses on developing probabilistic machine learning and deep learning methods.

 

Emmanouil Sifakis

Bioinformatician

Electronic and Computer Engineer by training with experience in Bioinformatics (Next-Generation Sequencing and Microarray data analysis), Biomedical Engineering (Image and Signal Processing), and Biostatistics.



E-mail: emmanouil.sifakis@scilifelab.se

 

Hosein Toosi

Research engineer



E-mail: hosein.toosi@scilifelab.se

 
Alumni
Former Ph.D. Students
  • Lars Arvestad, SU
  • Lars Ivansson
  • Isaac Elias, Google
  • Örjan Svensson, KTH
  • Ali Tofigh, Google
  • Hossein Farahani, BCCRC
  • Joel Sjöstrand
  • Owais Mahmudi
  • Ikram Ullah, KS
  • Auwn Sayyed, KTH
  • Negar Safinianaini
  • Hazal Koptagel
  • Mohammadreza Mohaghegh Neyshabouri
  • Mandi Chen
Former Post-docs
  • Ann-Charlotte Berglund
  • Öjvind Johansson
  • Pekka Parviainen
  • Hanna Härdin
  • Olivier Bilenne
  • Ayan Chaudhury
  • Seong-Hwan Jun
  • Niharika Gauraha
  • Prasoon Agarwal
  • Golnaz Taheri
Former Master’s Students
  • Klas Wijk