Team

Jens Lagergren, Ph.D.

Professor

E-mail: jens.lagergren@scilifelab.se
Phone: +46 8 790 64 38
Google Scholar: Jens Lagergren
Twitter: @jens_lagergren

See research.

 

Mandi Chen

Ph.D. student

Mandi’s project is devoted to probabilistic models of all steps of single cell genomic sequencing and tumour evolution as well as inference methods for the tree reconstruction problem.

E-mail: mandi.chen@scilifelab.se

 

Seong-Hwan Jun, Ph.D.

Post-doc



E-mail: seong.jun@scilifelab.se
Web: junseonghwan.github.io

 

Hazal Koptagel

Ph.D. student

Hazal’s research focuses on reconstruction of cell lineage trees based on single-cell DNA sequencing data.

E-mail: hazal.koptagel@scilifelab.se
Google Scholar: Hazal Koptagel

 

Mohammadreza Mohaghegh Neyshabouri

Ph.D. student

Mohammadreza’s project aims at producing progression models from single-cell data for tumour collections.

E-mail: mohammadreza.mohaghegh@scilifelab.se
Google Scholar: Mohammadreza Mohaghegh Neyshabouri

 
 
Alumni
Former Ph.D. Students
  • Lars Arvestad, SU
  • Lars Ivansson
  • Isaac Elias, Google
  • Örjan Svensson, KTH
  • Ali Tofigh, Google
  • Hossein Farahani, BCCRC
  • Joel Sjöstrand
  • Owais Mahmudi
  • Ikram Ullah, KS
  • Auwn Sayyed, KTH
Former Post-docs
  • Ann-Charlotte Berglund
  • Öjvind Johansson
  • Pekka Parviainen
  • Hanna Härdin
  • Olivier Bilenne
  • Ayan Chaudhury