Jens Lagergren, Ph.D.
Professor
E-mail: jens.lagergren@scilifelab.se
Phone: +46 8 790 64 38
Google Scholar: Jens Lagergren
Twitter: @jens_lagergren
See research.
Mandi Chen
Ph.D. student
Mandi’s project is devoted to probabilistic models of all steps of single cell genomic sequencing and tumour evolution as well as inference methods for the tree reconstruction problem.
E-mail: mandi.chen@scilifelab.se
Semih Kurt
Ph.D. student
Semih’s research interests are probabilistic models and inferences for single-cell sequencing.
E-mail: semih.kurt@scilifelab.se
Oskar Kviman
Ph.D. student
Oskar’s project concerns developing probabilistic machine learning and deep learning methods for phylogenetic tree inference and single cell-seq problems.
E-mail: okviman@kth.se
Google Scholar: Oskar Kviman
Harald Melin
Ph.D. student
Harald’s project focuses on variational Bayesian methods for phylogenetic inference of metastatic cancer using single-cell data.
E-mail: haraldme@kth.se
Ricky Molén
Ph.D. student
Ricky’s research focuses on developing probabilistic machine learning and deep learning methods.
Emmanouil Sifakis
Bioinformatician
Electronic and Computer Engineer by training with experience in Bioinformatics (Next-Generation Sequencing and Microarray data analysis), Biomedical Engineering (Image and Signal Processing), and Biostatistics.
E-mail: emmanouil.sifakis@scilifelab.se
Hosein Toosi
Research engineer
E-mail: hosein.toosi@scilifelab.se
Former Ph.D. Students
- Lars Arvestad, SU
- Lars Ivansson
- Isaac Elias, Google
- Örjan Svensson, KTH
- Ali Tofigh, Google
- Hossein Farahani, BCCRC
- Joel Sjöstrand
- Owais Mahmudi
- Ikram Ullah, KS
- Auwn Sayyed, KTH
- Negar Safinianaini
- Hazal Koptagel
- Mohammadreza Mohaghegh Neyshabouri
Former Post-docs
- Ann-Charlotte Berglund
- Öjvind Johansson
- Pekka Parviainen
- Hanna Härdin
- Olivier Bilenne
- Ayan Chaudhury
- Seong-Hwan Jun
- Niharika Gauraha
- Prasoon Agarwal
- Golnaz Taheri
Former Master’s Students
- Klas Wijk